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Molecular docking was conducted using AutoDock 4.2.3 by obtaining the 3D structure of the protein encoded by the key gene (in PDB format) and the structure of the candidate gut metabolite (in SDF format) for docking score calculation

Increasing PCR Fragment Stability and Protein Yields in a Cell-Free System with Genetically Modified Escherichia Coli Extracts

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Quinn JA, Graeber CT, Frackelton AR, Kim M, Schwarzbauer JE, Filardo EJ

Characterizing the sphingolipid signaling pathway that remediates defects associated with loss of the yeast amphiphysin-like orthologs, Rvs161p and Rvs167p